- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Class | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | galGal3-80 | mir-673 | mmu-miR-673-5p | 20/22 | chr6 | - | 22-43 | 16292659-16292751 | 0.996291 | Ortholog | 2/3 | 2/5 |
2 | galGal3-92 | mir-297 | hsa-miR-297 | 19/21 | chrUn_random | + | 7-26 | 19940142-19940201 | 0.995939 | Ortholog | 5/47 | 6/705 |
3 | galGal3-40 | mir-297 | rno-miR-297 | 21/23 | chr2 | + | 13-35 | 129935511-129935589 | 0.995845 | Ortholog | 5/47 | 6/705 |
4 | galGal3-33 | mir-1187 | mmu-miR-1187 | 21/23 | chr2 | + | 17-38 | 56589124-56589209 | 0.992235 | Ortholog | 1/43 | 3/1248 |
5 | galGal3-45 | mir-966 | dme-miR-966 | 19/21 | chr2 | - | 50-69 | 61484333-61484420 | 0.988285 | Ortholog | 1/20 | 1/30 |
6 | galGal3-30 | mir-1346 | oan-miR-1346 | 18/18 | chr18 | + | 6-23 | 9216701-9216773 | 0.987464 | Ortholog | 1/10 | 1/11 |
7 | galGal3-71 | mir-2049 | nve-miR-2049* | 20/22 | chr4 | - | 49-70 | 47135153-47135247 | 0.985482 | Ortholog | 1/2 | 1/2 |
8 | galGal3-1 | mir-1842 | cfa-miR-1842 | 19/21 | chr1 | + | 13-31 | 63895332-63895412 | 0.980619 | Ortholog | 1/4 | 1/4 |
9 | galGal3-75 | mir-705 | mmu-miR-705 | 19/20 | chr5 | + | 27-46 | 60648088-60648181 | 0.97397 | Ortholog | 2/21 | 2/46 |
10 | galGal3-38 | mir-297 | mmu-miR-297a | 20/22 | chr2 | + | 24-45 | 99686439-99686531 | 0.972582 | Ortholog | 5/47 | 6/705 |
11 | galGal3-47 | mir-674 | rno-miR-674-3p | 21/22 | chr20 | + | 14-34 | 606821-606900 | 0.967655 | Ortholog | 2/3 | 1/3 |
12 | galGal3-44 | mir-297 | rno-miR-297 | 21/23 | chr2 | - | 37-58 | 58795010-58795117 | 0.966934 | Ortholog | 5/47 | 6/705 |
13 | galGal3-9 | mir-574 | hsa-miR-574-5p | 21/23 | chr1 | - | 30-52 | 56692401-56692501 | 0.942295 | Ortholog | 3/44 | 1/2260 |
14 | galGal3-64 | mir-1187 | mmu-miR-1187 | 21/23 | chr4 | + | 50-72 | 23848933-23849019 | 0.929622 | Ortholog | 1/43 | 3/1248 |
15 | galGal3-37 | mir-98 | hsa-miR-98 | 20/22 | chr2 | + | 45-66 | 87345447-87345515 | 0.921922 | Ortholog | 13/19 | 1/20 |
16 | galGal3-78 | mir-669 | mmu-miR-669n | 20/20 | chr6 | + | 29-48 | 22295009-22295105 | 0.920335 | Ortholog | 1/23 | 1/87 |
17 | galGal3-61 | mir-1376 | oan-miR-1376* | 19/21 | chr3 | + | 13-32 | 66680190-66680270 | 0.916962 | Ortholog | 1/3 | 1/3 |
18 | galGal3-10 | mir-297 | mmu-miR-297a | 20/22 | chr1 | - | 45-66 | 65756395-65756481 | 0.912041 | Ortholog | 5/47 | 6/705 |
19 | galGal3-11 | mir-424 | hsa-miR-424 | 20/22 | chr1 | - | 49-70 | 72708564-72708646 | 0.896034 | Ortholog | 4/14 | 1/14 |
20 | galGal3-15 | mir-297 | mmu-miR-297a | 20/22 | chr1 | - | 49-70 | 124435179-124435265 | 0.887134 | Ortholog | 5/47 | 6/705 |
21 | galGal3-69 | mir-673 | mmu-miR-673-5p | 20/22 | chr4 | - | 20-41 | 14675153-14675243 | 0.870594 | Ortholog | 2/3 | 2/5 |
22 | galGal3-57 | mir-705 | mmu-miR-705 | 19/20 | chr26 | - | 39-58 | 958801-958909 | 0.868901 | Ortholog | 2/21 | 2/46 |
23 | galGal3-72 | mir-1193 | mmu-miR-1193 | 19/21 | chr5 | + | 30-49 | 43464638-43464733 | 0.836877 | Ortholog | 2/15 | 1/15 |
24 | galGal3-22 | mir-1187 | mmu-miR-1187 | 21/23 | chr13 | + | 31-53 | 1736397-1736497 | 0.829711 | Ortholog | 1/43 | 3/1248 |
25 | galGal3-49 | mir-127 | hsa-miR-127-5p | 20/22 | chr20 | - | 20-41 | 362514-362604 | 0.82699 | Ortholog | 13/23 | 1/26 |
26 | galGal3-103 | mir-2044 | nve-miR-2044 | 20/22 | chrZ | + | 46-67 | 6055156-6055234 | 0.817825 | Ortholog | 1/3 | 1/3 |
Total | 26 record(s). |